Structural models and functional annotations for the Sphagnum divinum proteome.
- Davidson, Russell B | Oak Ridge National Laboratory
- Coletti, Mark | Oak Ridge National Laboratory
- Gao, Mu | Georgia Tech
- Sedova, Ada | Oak Ridge National Laboratory
Overview
Description
This dataset contains the structural models for the primary transcripts of the Sphagnum divinum proteome. Additionally, for a subset of these proteins, sequence and structural alignment results are provided. This dataset represents the most thorough structural study of a Sphagnum species, also known as peat mosses, by providing three-dimensional atomic resolution structures of the majority of the encoded proteins as well as structural alignment results used in the application of annotating the proteome. References (DOI) AlphaFold v2 Monomer: https://doi.org/10.1038/s41586-021-03819-2. References (DOI) US-align2: https://doi.org/10.1038/s41592-022-01585-1
Funding resources
DOE contract number
ERKPA05, ERKP917Originating research organization
Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)Sponsoring organization
Office of Science (SC), Biological and Environmental Research (BER) (SC-23)Related resources
- References (DOI): https://doi.org/10.1038/s41586-021-03819-2
- References (DOI): https://doi.org/10.1038/s41592-022-01585-1
Details
DOI
10.13139/ORNLNCCS/1973885Release date
May 31, 2023Dataset
Dataset type
ND Numeric DataAcknowledgements
Users should acknowledge the OLCF in all publications and presentations that speak to work performed on OLCF resources:
This work was carried out [in part] at Oak Ridge National Laboratory, managed by UT-Battelle, LLC for the U.S. Department of Energy under contract DE-AC05-00OR22725.
Category
- 59 BASIC BIOLOGICAL SCIENCES,
- 74 ATOMIC AND MOLECULAR PHYSICS,
- 97 MATHEMATICS AND COMPUTING
Keywords
- Protein Structure Prediction,
- Functional Annotation