Structural models and functional annotations for the Sphagnum divinum proteome.

10.13139/ORNLNCCS/1973885

This dataset contains the structural models for the primary transcripts of the Sphagnum divinum proteome. Additionally, for a subset of these proteins, sequence and structural alignment results are provided. This dataset represents the most thorough structural study of a Sphagnum species, also known as peat mosses, by providing three-dimensional atomic resolution structures of the majority of the encoded proteins as well as structural alignment results used in the application of annotating the proteome. References (DOI) AlphaFold v2 Monomer: https://doi.org/10.1038/s41586-021-03819-2. References (DOI) US-align2: https://doi.org/10.1038/s41592-022-01585-1

Published: 2023-05-31 13:06:38 Download Dataset

Dataset Properties

Field Value
Authors
  • Davidson, Russell B Oak Ridge National Laboratory
  • Coletti, Mark Oak Ridge National Laboratory
  • Gao, Mu Georgia Tech
  • Sedova, Ada Oak Ridge National Laboratory
Project Identifier BIF135
Dataset Type ND Numeric Data
Subjects
  • 59 BASIC BIOLOGICAL SCIENCES
  • 74 ATOMIC AND MOLECULAR PHYSICS
  • 97 MATHEMATICS AND COMPUTING
Keywords
  • Protein Structure Prediction
  • Functional Annotation
Originating Organizations Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
Sponsoring Organizations Office of Science (SC), Biological and Environmental Research (BER) (SC-23)
DOE Contract ERKPA05, ERKP917
Related Identifiers
  • References (DOI) 10.1038/s41586-021-03819-2
  • References (DOI) 10.1038/s41592-022-01585-1

Acknowledgements

Papers using this dataset are requested to include the following text in their acknowledgements:

*Support for 10.13139/ORNLNCCS/1973885 is provided by the U.S. Department of Energy, project BIF135 under Contract ERKPA05, ERKP917. This research used resources of the Oak Ridge Leadership Computing Facility, which is a DOE Office of Science User Facility.