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Structural models and functional annotations for the Sphagnum divinum proteome

    Russell B Davidson | Oak Ridge National Laboratory
    Mark Coletti | Oak Ridge National Laboratory
    Mu Gao | Georgia Tech
    Ada Sedova | Oak Ridge National Laboratory
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Description

This dataset contains the structural models for the primary transcripts of the Sphagnum divinum proteome. Additionally, for a subset of these proteins, sequence and structural alignment results are provided. This dataset represents the most thorough structural study of a Sphagnum species, also known as peat mosses, by providing three-dimensional atomic resolution structures of the majority of the encoded proteins as well as structural alignment results used in the application of annotating the proteome. References (DOI) AlphaFold v2 Monomer: https://doi.org/10.1038/s41586-021-03819-2. References (DOI) US-align2: https://doi.org/10.1038/s41592-022-01585-1

Funding Information

DOE Contract Number

AC05-00OR22725

Originating Research Organization

Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization

Office of Science (SC), Biological and Environmental Research (BER) (SC-23)

Project Identifier

BIF135

Related Works

Details

DOI

https://doi.org/10.13139/ORNLNCCS/1973885

Release Date

May 31, 2023

Subject

BASIC BIOLOGICAL SCIENCES, ATOMIC AND MOLECULAR PHYSICS, MATHEMATICS AND COMPUTING

Keywords

Protein Structure Prediction, Functional Annotation

Dataset

Dataset Type

ND Numeric Data

Other Contract Number(s)

ERKPA05; ERKP917

Cite This Dataset:

Davidson, R., Coletti, M., Gao, M., Sedova, A. (2023). Structural models and functional annotations for the Sphagnum divinum proteome. Oak Ridge National Laboratory. https://doi.org/10.13139/ORNLNCCS/1973885.

Acknowledgements

This work was carried out [in part] at Oak Ridge National Laboratory, managed by UT-Battelle, LLC for the U.S. Department of Energy under contract DE-AC05-00OR22725.